|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | cytoplasm, | 0.006327435 | GO:0005737 | | aromatic amino acid family metabolic process, | 0.007490314 | GO:0009072 | | carbohydrate phosphorylation, | 0.007490314 | GO:0046835 | | galactose metabolic process, | 0.012117702 | GO:0006012 | | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, | 0.012456799 | GO:0016705 | | galactokinase activity, | 0.012456799 | GO:0004335 | | iron ion binding, | 0.013236508 | GO:0005506 | | heme binding, | 0.013236508 | GO:0020037 | | electron carrier activity, | 0.013236508 | GO:0009055 | | kinase activity, | 0.026943372 | GO:0016301 | | Galactose_metabolism | 0.027465325 | KEGG | | Amino_sugar_and_nucleotide_sugar_metabolism | 0.02846825 | KEGG |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000040G1260 | Mevalonate/galactokinase family protein | AT3G06580 (0.00E+00) | | PH01000172G0030 | glutathione S-transferase zeta 1 | AT2G02390 (3.30E-61) | | PH01000708G0750 | cytochrome P450, family 704, subfamily A, polypeptide 2 | AT2G45510 (5.00E-141) | | PH01001024G0330 | Calcium-dependent lipid-binding (CaLB domain) family protein | AT5G12300 (5.80E-65) | | PH01001398G0110 | F-box family protein | AT5G07610 (3.90E-18) | | PH01004659G0030 | cytochrome P450, family 71, subfamily B, polypeptide 23 | AT3G26210 (8.30E-87) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000133 | C2H2 Transcription_Regulator(from PlantTFDB)
RWP-RK Transcription_Regulator(from iTAK)
Nin-like Transcription_Regulator(from PlantTFDB)
carbohydrate phosphorylation,
| details | | CFinderM000319 | nucleoside_diphosphate_phosphorylation
carbohydrate phosphorylation,
histone_H4_acetylation
UTP biosynthetic process,
CTP biosynthetic process,
histone_H2A_acetylation
GTP biosynthetic process,
aromatic amino acid family metabolic process,
chromatin remodeling,
| details | | CFinderM000381 | intracellular protein transport,
| details | | CFinderM000475 | TKL-Pl-6 (from iTAK)
carbohydrate phosphorylation,
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
galactokinase activity,
diphosphate-fructose-6-phosphate 1-phosphotransferase activity,
fructose_6-phosphate_metabolic_process
galactose metabolic process,
Fructose_and_mannose_metabolism
Galactose_metabolism
ATP binding,
6-phosphofructokinase activity,
kinase activity,
| details | | CFinderM000606 | histone_H2A_acetylation
CTP biosynthetic process,
histone_H4_acetylation
protein neddylation,
nucleoside_diphosphate_phosphorylation
UTP biosynthetic process,
GTP biosynthetic process,
carbohydrate phosphorylation,
chromatin remodeling,
| details | | CFinderM000915 | UTP biosynthetic process,
nucleoside_diphosphate_phosphorylation
CTP biosynthetic process,
GTP biosynthetic process,
regulation of actin filament polymerization,
nucleoside diphosphate kinase activity,
cytoskeleton,
Pyrimidine_metabolism
Purine_metabolism
| details | | CFinderM001536 | carbohydrate phosphorylation,
galactose metabolic process,
CAMK_CDPK (from iTAK)
Others Transcription_Regulator(from iTAK)
galactokinase activity,
Galactose_metabolism
Amino_sugar_and_nucleotide_sugar_metabolism
| details | | CFinderM001587 | Valine,_leucine_and_isoleucine_biosynthesis
Valine,_leucine_and_isoleucine_degradation
nucleoside_diphosphate_phosphorylation
branched chain family amino acid metabolic process,
CTP biosynthetic process,
GTP biosynthetic process,
UTP biosynthetic process,
nucleoside diphosphate kinase activity,
branched-chain-amino-acid transaminase activity,
Pantothenate_and_CoA_biosynthesis
| details | | CFinderM001692 | TKL-Pl-4 (from iTAK)
carbohydrate phosphorylation,
Ribosome
translation,
galactose metabolic process,
intracellular,
galactokinase activity,
Galactose_metabolism
Amino_sugar_and_nucleotide_sugar_metabolism
structural constituent of ribosome,
kinase activity,
| details |
4.Expression profilings |
