CFinderM000475's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
TKL-Pl-6 (from iTAK)0.011794793GFam
carbohydrate phosphorylation,0.020413645GO:0046835
RLK-Pelle_RLCK-VIIa-2 (from iTAK)0.025545359GFam
galactokinase activity,0.028014223GO:0004335
diphosphate-fructose-6-phosphate 1-phosphotransferase activity,0.028014223GO:0047334
fructose_6-phosphate_metabolic_process0.028872373GO:0006002
galactose metabolic process,0.028872373GO:0006012
Fructose_and_mannose_metabolism0.043021228KEGG
Galactose_metabolism0.043021228KEGG
ATP binding,0.048379397GO:0005524
6-phosphofructokinase activity,0.048436754GO:0003872
kinase activity,0.048436754GO:0016301

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000009G1510-- (-)
PH01000009G1870-- (-)
PH01000038G0110Protein kinase superfamily proteinAT2G05940 (7.00E-143)
PH01000040G1260Mevalonate/galactokinase family proteinAT3G06580 (0.00E+00)
PH01001087G0150Phosphofructokinase family proteinAT1G76550 (0.00E+00)
PH01001398G0110F-box family proteinAT5G07610 (3.90E-18)
PH01001974G0220Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domainAT1G16270 (1.20E-65)
PH01002828G0270Sec14p-like phosphatidylinositol transfer family proteinAT1G75170 (7.40E-73)
PH01004612G0030Protein of unknown function (DUF1666)AT5G39785 (1.10E-88)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000133C2H2 Transcription_Regulator(from PlantTFDB)
RWP-RK Transcription_Regulator(from iTAK)
Nin-like Transcription_Regulator(from PlantTFDB)
carbohydrate phosphorylation,
details
CFinderM000319nucleoside_diphosphate_phosphorylation
carbohydrate phosphorylation,
histone_H4_acetylation
UTP biosynthetic process,
CTP biosynthetic process,
histone_H2A_acetylation
GTP biosynthetic process,
aromatic amino acid family metabolic process,
chromatin remodeling,
details
CFinderM000589TKL-Pl-1 (from iTAK)
TKL-Pl-6 (from iTAK)
Fructose_and_mannose_metabolism
6-phosphofructokinase complex,
diphosphate-fructose-6-phosphate 1-phosphotransferase activity,
cysteine-type endopeptidase activity,
6-phosphofructokinase activity,
protein kinase activity,
ATP binding,
transferase activity, transferring phosphorus-containing groups,
protein phosphorylation,
fructose_6-phosphate_metabolic_process
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
details
CFinderM000606histone_H2A_acetylation
CTP biosynthetic process,
histone_H4_acetylation
protein neddylation,
nucleoside_diphosphate_phosphorylation
UTP biosynthetic process,
GTP biosynthetic process,
carbohydrate phosphorylation,
chromatin remodeling,
details
CFinderM000824cytoplasm,
aromatic amino acid family metabolic process,
carbohydrate phosphorylation,
galactose metabolic process,
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,
galactokinase activity,
iron ion binding,
heme binding,
electron carrier activity,
kinase activity,
Galactose_metabolism
Amino_sugar_and_nucleotide_sugar_metabolism
details
CFinderM000915UTP biosynthetic process,
nucleoside_diphosphate_phosphorylation
CTP biosynthetic process,
GTP biosynthetic process,
regulation of actin filament polymerization,
nucleoside diphosphate kinase activity,
cytoskeleton,
Pyrimidine_metabolism
Purine_metabolism
details
CFinderM000925Ribosome
translation,
fructose_6-phosphate_metabolic_process
Fructose_and_mannose_metabolism
GARP-G2-like Transcription_Regulator(from iTAK)
G2-like Transcription_Regulator(from PlantTFDB)
diphosphate-fructose-6-phosphate 1-phosphotransferase activity,
structural constituent of ribosome,
large ribosomal subunit,
6-phosphofructokinase complex,
6-phosphofructokinase activity,
details
CFinderM001197Ribosome
translation,
G2-like Transcription_Regulator(from PlantTFDB)
GARP-G2-like Transcription_Regulator(from iTAK)
L-ascorbic acid binding,
structural constituent of ribosome,
Arginine_and_proline_metabolism
details
CFinderM001536carbohydrate phosphorylation,
galactose metabolic process,
CAMK_CDPK (from iTAK)
Others Transcription_Regulator(from iTAK)
galactokinase activity,
Galactose_metabolism
Amino_sugar_and_nucleotide_sugar_metabolism
details
CFinderM001587Valine,_leucine_and_isoleucine_biosynthesis
Valine,_leucine_and_isoleucine_degradation
nucleoside_diphosphate_phosphorylation
branched chain family amino acid metabolic process,
CTP biosynthetic process,
GTP biosynthetic process,
UTP biosynthetic process,
nucleoside diphosphate kinase activity,
branched-chain-amino-acid transaminase activity,
Pantothenate_and_CoA_biosynthesis
details
CFinderM001692TKL-Pl-4 (from iTAK)
carbohydrate phosphorylation,
Ribosome
translation,
galactose metabolic process,
intracellular,
galactokinase activity,
Galactose_metabolism
Amino_sugar_and_nucleotide_sugar_metabolism
structural constituent of ribosome,
kinase activity,
details
CFinderM001693translation,
Ribosome
structural constituent of ribosome,
intracellular,
details
CFinderM001735TALE Transcription_Regulator(from PlantTFDB)
HB-BELL Transcription_Regulator(from iTAK)
details

4.Expression profilings


Show details about module gene expression profiling