|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | GT32 GlycosylTransferases | 0.00412442 | GFam | | Golgi stack, | 0.004497821 | GO:0005795 | | CMGC_SRPK (from iTAK) | 0.005152867 | GFam |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000034G0840 | binding | AT2G22125 (0.00E+00) | | PH01000054G1820 | UDP-glucuronic acid decarboxylase 1 | AT3G53520 (3.00E-170) | | PH01000206G0790 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | AT2G40280 (3.30E-83) | | PH01000259G1120 | auxin response factor 19 | AT1G19220 (7.00E-86) | | PH01000804G0520 | Protein of unknown function (DUF300) | AT5G26740 (2.00E-129) | | PH01001001G0050 | DEA(D/H)-box RNA helicase family protein | AT1G59990 (3.00E-146) | | PH01001001G0620 | acyl-activating enzyme 17 | AT5G23050 (0.00E+00) | | PH01001387G0440 | S-locus lectin protein kinase family protein | AT1G61610 (4.00E-132) | | PH01001639G0210 | Kinase interacting (KIP1-like) family protein | AT1G03470 (6.80E-33) | | PH01001808G0250 | ser/arg-rich protein kinase 4 | AT3G53030 (0.00E+00) | | PH01002322G0270 | alpha 1,4-glycosyltransferase family protein | AT4G19900 (5.00E-101) | | PH01004879G0040 | ADP glucose pyrophosphorylase 1 | AT5G48300 (0.00E+00) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000230 | biosynthetic process,
glycogen biosynthetic process,
RLK-Pelle_LRR-XI-1 (from iTAK)
Starch_and_sucrose_metabolism
Amino_sugar_and_nucleotide_sugar_metabolism
| details | | CFinderM000289 | RLK-Pelle_LRR-XI-1 (from iTAK)
glycogen biosynthetic process,
Starch_and_sucrose_metabolism
Amino_sugar_and_nucleotide_sugar_metabolism
| details | | CFinderM000438 | GTnc GlycosylTransferases
Base_excision_repair
methylation,
metabolic process,
amino_acid_transmembrane_transport
base-excision repair,
fatty-acyl-CoA binding,
DNA-3-methyladenine glycosylase activity,
amino acid transmembrane transporter activity,
catalytic activity,
| details | | CFinderM000483 | GRAS Transcription_Regulator(from PlantTFDB)
TKL-Pl-4 (from iTAK)
Arachidonic_acid_metabolism
glycogen biosynthetic process,
amino_acid_transmembrane_transport
| details | | CFinderM000618 | TKL-Pl-4 (from iTAK)
Valine,_leucine_and_isoleucine_degradation
| details | | CFinderM000619 | TKL-Pl-4 (from iTAK)
Ubiquitin_mediated_proteolysis
| details | | CFinderM000850 | RLK-Pelle_DLSV (from iTAK)
| details | | CFinderM001237 | | details | | CFinderM001296 | CMGC_DYRK-PRP4 (from iTAK)
RLK-Pelle_DLSV (from iTAK)
recognition of pollen,
protein phosphorylation,
| details | | CFinderM001327 | | details | | CFinderM001372 | Spliceosome
GT32 GlycosylTransferases
Golgi stack,
AGC_NDR (from iTAK)
GTnc GlycosylTransferases
thiol oxidase activity,
nucleotide binding,
snRNA_binding
| details | | CFinderM001373 | GTnc GlycosylTransferases
phospholipid transport,
cellular metabolic process,
cation transport,
| details | | CFinderM001526 | protein catabolic process,
| details | | CFinderM001610 | Sphingolipid_metabolism
alpha-Linolenic_acid_metabolism
carboxylic acid metabolic process,
catalytic activity,
carboxy-lyase activity,
| details | | CFinderM001630 | GTnc GlycosylTransferases
HSF Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001704 | RLK-Pelle_DLSV (from iTAK)
| details |
4.Expression profilings |
