CFinderM001681's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
HB-other Transcription_Regulator(from PlantTFDB)1.11E-05GFam
tRNA_3'-trailer_cleavage0.001125158GO:0042779
endoribonuclease activity, producing 5'-phosphomonoesters,0.020415239GO:0016891
regulation of transcription, DNA-dependent,0.022661452GO:0006355
sequence-specific DNA binding,0.023455686GO:0043565
RNA_transport0.029453253KEGG
sequence-specific DNA binding transcription factor activity,0.034061468GO:0003700

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000080G1620-- (-)
PH01000279G0700Homeodomain-like transcriptional regulatorAT4G12750 (2.00E-102)
PH01000288G0110ARM repeat superfamily proteinAT5G48120 (6.10E-92)
PH01000340G1000Homeodomain-like transcriptional regulatorAT4G12750 (1.60E-52)
PH01000753G0690Tetratricopeptide repeat (TPR)-like superfamily proteinAT4G32820 (0.00E+00)
PH01001821G0140tRNAse Z3AT1G52160 (0.00E+00)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000591HB-other Transcription_Regulator(from PlantTFDB)
SNARE_interactions_in_vesicular_transport
WASH_complex
actin cytoskeleton,
spliceosomal complex,
pre-mRNA_intronic_binding
details
CFinderM000938proton-transporting two-sector ATPase complex, proton-transporting domain,
proton-transporting V-type ATPase, V0 domain,
binding,
mRNA_surveillance_pathway
hydrogen ion transmembrane transporter activity,
ATP hydrolysis coupled proton transport,
TORC1_complex
Phagosome
Oxidative_phosphorylation
phosphotransferase activity, alcohol group as acceptor,
TOR_signaling
rRNA_catabolic_process
details
CFinderM001298HB-other Transcription_Regulator(from PlantTFDB)
details
CFinderM001522SNF2 Transcription_Regulator(from iTAK)
nucleolus,
nuclear pore,
RNA_transport
details
CFinderM001552HB-other Transcription_Regulator(from PlantTFDB)
Protein_processing_in_endoplasmic_reticulum
details
CFinderM001695C3H Transcription_Regulator(from PlantTFDB)
DNA photolyase activity,
details

4.Expression profilings