|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | mitochondrial inner membrane presequence translocase complex, | 0.001686814 | GO:0005744 | | P-P-bond-hydrolysis-driven protein transmembrane transporter activity, | 0.008247292 | GO:0015450 | | Others Transcription_Regulator(from iTAK) | 0.014540458 | GFam | | two-component response regulator activity, | 0.024152708 | GO:0000156 | | Protein_processing_in_endoplasmic_reticulum | 0.040378107 | KEGG |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000056G0580 | transducin family protein / WD-40 repeat family protein | AT3G63460 (0.00E+00) | | PH01000750G0190 | Vps51/Vps67 family (components of vesicular transport) protein | AT4G02030 (0.00E+00) | | PH01001075G0130 | - | AT5G13970 (3.00E-28) | | PH01001650G0180 | Leucine-rich repeat (LRR) family protein | AT3G50690 (6.50E-58) | | PH01002743G0140 | translocase inner membrane subunit 17-2 | AT2G37410 (1.00E-48) | | PH01004024G0030 | Sec14p-like phosphatidylinositol transfer family protein | AT1G72160 (3.20E-35) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000418 | tRNA aminoacylation for protein translation,
| details | | CFinderM000506 | RLK-Pelle_RLCK-VIIa-2 (from iTAK)
Protein_processing_in_endoplasmic_reticulum
| details | | CFinderM000520 | ER_membrane_protein_complex
GT96 GlycosylTransferases
TKL-Pl-4 (from iTAK)
| details | | CFinderM000864 | mitochondrial inner membrane presequence translocase complex,
P-P-bond-hydrolysis-driven protein transmembrane transporter activity,
Endocytosis
| details | | CFinderM000933 | TKL-Pl-4 (from iTAK)
Others Transcription_Regulator(from iTAK)
response to heat,
Protein_processing_in_endoplasmic_reticulum
| details | | CFinderM000990 | MBF1 Transcription_Regulator(from iTAK)
RNA_degradation
| details | | CFinderM001063 | CMGC_CDK-CDK8 (from iTAK)
protein arginylation,
arginyltransferase activity,
RNA_degradation
| details | | CFinderM001099 | HSF Transcription_Regulator(from PlantTFDB)
cellular process,
| details | | CFinderM001150 | CBM22 Carbohydrate-Binding_Modules
GH10 Glycoside_Hydrolases
nucleosome,
| details | | CFinderM001264 | cis-Golgi network,
Rab GDP-dissociation inhibitor activity,
C2H2 Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001290 | Protein_processing_in_endoplasmic_reticulum
AGC_NDR (from iTAK)
| details | | CFinderM001309 | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
cysteine biosynthetic process from serine,
aromatic amino acid family biosynthetic process,
Sulfur_metabolism
serine O-acetyltransferase activity,
3-deoxy-7-phosphoheptulonate synthase activity,
Cysteine_and_methionine_metabolism
| details | | CFinderM001347 | ubiquitin-dependent protein catabolic process,
| details | | CFinderM001398 | cis-Golgi network,
vesicle docking involved in exocytosis,
exocyst,
| details | | CFinderM001495 | integral to Golgi membrane,
intra-Golgi vesicle-mediated transport,
cysteine metabolic process,
STE_STE11 (from iTAK)
Sulfur_relay_system
Thiamine_metabolism
cysteine desulfurase activity,
| details | | CFinderM001496 | Sulfur_relay_system
Thiamine_metabolism
COPI vesicle coat,
clathrin adaptor complex,
cysteine desulfurase activity,
cysteine metabolic process,
retrograde vesicle-mediated transport, Golgi to ER,
| details | | CFinderM001672 | STE_STE11 (from iTAK)
| details | | CFinderM001863 | Golgi apparatus,
clathrin adaptor complex,
membrane coat,
binding,
Protein_processing_in_endoplasmic_reticulum
protein transporter activity,
| details |
4.Expression profilings |
