CFinderM001347's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
ubiquitin-dependent protein catabolic process,0.033507295GO:0006511

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000158G1370Chaperone DnaJ-domain superfamily proteinAT2G01710 (2.40E-32)
PH01000548G0090DNA/RNA-binding protein Kin17, conserved regionAT1G55460 (8.00E-130)
PH01000740G0850CCCH-type zinc fingerfamily protein with RNA-binding domainAT2G29580 (3.00E-173)
PH01000750G0190Vps51/Vps67 family (components of vesicular transport) proteinAT4G02030 (0.00E+00)
PH01001142G0210-- (-)
PH01002488G0100F-box family proteinAT5G45360 (4.50E-74)
PH01003292G0030SKP1-like 4AT1G20140 (8.50E-62)
PH01005440G0060-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000008TKL-Pl-4 (from iTAK)
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
transferase activity, transferring phosphorus-containing groups,
protein phosphorylation,
Spliceosome
protein kinase activity,
ATP binding,
protein serine/threonine kinase activity,
exocyst,
chloroplast,
details
CFinderM000101RLK-Pelle_RLCK-VIIa-2 (from iTAK)
response to heat,
details
CFinderM000195pyridoxine biosynthetic process,
S-adenosylmethionine_biosynthetic_process
proteolysis,
pyridoxamine-phosphate oxidase activity,
oxidoreductase activity, acting on the CH-NH2 group of donors,
methionine adenosyltransferase activity,
Endocytosis
aminopeptidase activity,
details
CFinderM000206mitochondrial inner membrane presequence translocase complex,
P-P-bond-hydrolysis-driven protein transmembrane transporter activity,
Others Transcription_Regulator(from iTAK)
two-component response regulator activity,
Protein_processing_in_endoplasmic_reticulum
details
CFinderM000418tRNA aminoacylation for protein translation,
details
CFinderM000761tRNA aminoacylation for protein translation,
details
CFinderM000934protein import into nucleus,
nucleobase-containing compound metabolic process,
bZIP Transcription_Regulator(from PlantTFDB)
RNA binding,
details
CFinderM000935tRNA aminoacylation for protein translation,
Spliceosome
details
CFinderM000937details
CFinderM001099HSF Transcription_Regulator(from PlantTFDB)
cellular process,
details
CFinderM001239DNA repair,
details
CFinderM001264cis-Golgi network,
Rab GDP-dissociation inhibitor activity,
C2H2 Transcription_Regulator(from PlantTFDB)
details
CFinderM001290Protein_processing_in_endoplasmic_reticulum
AGC_NDR (from iTAK)
details
CFinderM001309Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
cysteine biosynthetic process from serine,
aromatic amino acid family biosynthetic process,
Sulfur_metabolism
serine O-acetyltransferase activity,
3-deoxy-7-phosphoheptulonate synthase activity,
Cysteine_and_methionine_metabolism
details
CFinderM001398cis-Golgi network,
vesicle docking involved in exocytosis,
exocyst,
details
CFinderM001496Sulfur_relay_system
Thiamine_metabolism
COPI vesicle coat,
clathrin adaptor complex,
cysteine desulfurase activity,
cysteine metabolic process,
retrograde vesicle-mediated transport, Golgi to ER,
details
CFinderM001672STE_STE11 (from iTAK)
details
CFinderM001863Golgi apparatus,
clathrin adaptor complex,
membrane coat,
binding,
Protein_processing_in_endoplasmic_reticulum
protein transporter activity,
details

4.Expression profilings