|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | tRNA aminoacylation for protein translation, | 0.017124891 | GO:0006418 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000185G1240 | Tetratricopeptide repeat (TPR)-like superfamily protein | AT3G29230 (9.00E-160) | | PH01000186G1170 | Pentatricopeptide repeat (PPR-like) superfamily protein | AT1G09820 (7.00E-100) | | PH01000673G0090 | CCCH-type zinc fingerfamily protein with RNA-binding domain | AT2G29580 (9.00E-174) | | PH01000750G0190 | Vps51/Vps67 family (components of vesicular transport) protein | AT4G02030 (0.00E+00) | | PH01001510G0330 | RING/U-box superfamily protein | AT2G23780 (1.80E-27) | | PH01003021G0200 | Cysteinyl-tRNA synthetase, class Ia family protein | AT3G56300 (3.80E-76) | | PH01003373G0060 | - | AT5G58100 (3.70E-57) | | PH01003460G0030 | - | AT1G78890 (3.20E-19) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000008 | TKL-Pl-4 (from iTAK)
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
transferase activity, transferring phosphorus-containing groups,
protein phosphorylation,
Spliceosome
protein kinase activity,
ATP binding,
protein serine/threonine kinase activity,
exocyst,
chloroplast,
| details | | CFinderM000101 | RLK-Pelle_RLCK-VIIa-2 (from iTAK)
response to heat,
| details | | CFinderM000131 | GT13 GlycosylTransferases
vacuolar_proton-transporting_V-type_ATPase,_V0_domain
Golgi membrane,
proton-transporting V-type ATPase, V0 domain,
| details | | CFinderM000206 | mitochondrial inner membrane presequence translocase complex,
P-P-bond-hydrolysis-driven protein transmembrane transporter activity,
Others Transcription_Regulator(from iTAK)
two-component response regulator activity,
Protein_processing_in_endoplasmic_reticulum
| details | | CFinderM000575 | Protein_processing_in_endoplasmic_reticulum
zinc ion binding,
| details | | CFinderM000656 | RLK-Pelle_RLCK-VIIa-2 (from iTAK)
protein binding,
zinc ion binding,
Protein_processing_in_endoplasmic_reticulum
| details | | CFinderM000761 | tRNA aminoacylation for protein translation,
| details | | CFinderM000835 | phenylalanyl-tRNA aminoacylation,
aminoacyl-tRNA ligase activity,
phenylalanine-tRNA ligase activity,
tRNA binding,
tRNA aminoacylation,
Aminoacyl-tRNA_biosynthesis
nucleotide binding,
magnesium ion binding,
cytoplasm,
GeBP Transcription_Regulator(from PlantTFDB)
RNA binding,
tRNA aminoacylation for protein translation,
ATP binding,
| details | | CFinderM000933 | TKL-Pl-4 (from iTAK)
Others Transcription_Regulator(from iTAK)
response to heat,
Protein_processing_in_endoplasmic_reticulum
| details | | CFinderM000935 | tRNA aminoacylation for protein translation,
Spliceosome
| details | | CFinderM000999 | exocytosis,
SBP Transcription_Regulator(from PlantTFDB)
exocyst,
Protein_processing_in_endoplasmic_reticulum
| details | | CFinderM001023 | vesicle docking involved in exocytosis,
vesicle-mediated transport,
| details | | CFinderM001099 | HSF Transcription_Regulator(from PlantTFDB)
cellular process,
| details | | CFinderM001264 | cis-Golgi network,
Rab GDP-dissociation inhibitor activity,
C2H2 Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001290 | Protein_processing_in_endoplasmic_reticulum
AGC_NDR (from iTAK)
| details | | CFinderM001309 | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
cysteine biosynthetic process from serine,
aromatic amino acid family biosynthetic process,
Sulfur_metabolism
serine O-acetyltransferase activity,
3-deoxy-7-phosphoheptulonate synthase activity,
Cysteine_and_methionine_metabolism
| details | | CFinderM001347 | ubiquitin-dependent protein catabolic process,
| details | | CFinderM001398 | cis-Golgi network,
vesicle docking involved in exocytosis,
exocyst,
| details | | CFinderM001485 | HSF Transcription_Regulator(from PlantTFDB)
myosin complex,
tRNA aminoacylation for protein translation,
| details | | CFinderM001496 | Sulfur_relay_system
Thiamine_metabolism
COPI vesicle coat,
clathrin adaptor complex,
cysteine desulfurase activity,
cysteine metabolic process,
retrograde vesicle-mediated transport, Golgi to ER,
| details | | CFinderM001672 | STE_STE11 (from iTAK)
| details | | CFinderM001728 | NAK (from iTAK)
vacuolar_proton-transporting_V-type_ATPase,_V0_domain
proton-transporting V-type ATPase, V0 domain,
exocyst,
ATP hydrolysis coupled proton transport,
exocytosis,
Oxidative_phosphorylation
Phagosome
| details | | CFinderM001863 | Golgi apparatus,
clathrin adaptor complex,
membrane coat,
binding,
Protein_processing_in_endoplasmic_reticulum
protein transporter activity,
| details |
4.Expression profilings |
