|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | Inositol_phosphate_metabolism | 0.042797192 | KEGG | | Phosphatidylinositol_signaling_system | 0.042797192 | KEGG | | Phagosome | 0.043765654 | KEGG | | Ribosome_biogenesis_in_eukaryotes | 0.043765654 | KEGG |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000050G0280 | - | - (-) | | PH01000092G1660 | Xanthine/uracil permease family protein | AT5G62890 (0.00E+00) | | PH01002091G0350 | Transducin/WD40 repeat-like superfamily protein | AT1G80670 (6.00E-110) | | PH01002373G0080 | ubiquitin-specific protease 4 | AT2G22310 (2.00E-162) | | PH01002392G0140 | Target of Myb protein 1 | AT1G21380 (4.00E-114) | | PH01002680G0160 | 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion binding;1-phosphatidylinositol-3-phosphate 5-kinases | AT4G33240 (0.00E+00) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000006 | CAMK_CDPK (from iTAK)
transporter activity,
transport,
transmembrane transport,
polygalacturonase activity,
| details | | CFinderM000133 | C2H2 Transcription_Regulator(from PlantTFDB)
RWP-RK Transcription_Regulator(from iTAK)
Nin-like Transcription_Regulator(from PlantTFDB)
carbohydrate phosphorylation,
| details | | CFinderM000239 | cullin-RING ubiquitin ligase complex,
glycogen_phosphorylase_activity
protein_binding,_bridging
actin filament binding,
phosphatidylserine biosynthetic process,
| details | | CFinderM000911 | intracellular,
Ribosome
translation,
PHD Transcription_Regulator(from iTAK)
structural constituent of ribosome,
protein import into nucleus,
| details | | CFinderM001281 | phospholipid transport,
phosphatidylinositol metabolic process,
Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
cellular protein metabolic process,
Phagosome
| details | | CFinderM001471 | regulation of translational initiation,
eukaryotic translation initiation factor 3 complex,
WRKY Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001597 | Phosphatidylinositol_signaling_system
Inositol_phosphate_metabolism
phosphatidylinositol metabolic process,
phosphatidylinositol phosphate kinase activity,
Phagosome
cellular protein metabolic process,
C3H Transcription_Regulator(from PlantTFDB)
membrane,
| details | | CFinderM001655 | transport,
transmembrane transport,
regulation_of_cell_cycle
transporter activity,
regulation_of_cyclin-dependent_protein_serine/threonine_kinase_activity
| details | | CFinderM001656 | GH43 Glycoside_Hydrolases
TKL-Pl-6 (from iTAK)
GH35 Glycoside_Hydrolases
Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
| details | | CFinderM001657 | Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
phosphatidylinositol metabolic process,
Phagosome
cellular protein metabolic process,
phosphatidylinositol phosphate kinase activity,
aspartic-type endopeptidase activity,
GH35 Glycoside_Hydrolases
phospholipid transport,
proteolysis,
metal ion binding,
| details | | CFinderM001658 | Phosphatidylinositol_signaling_system
Inositol_phosphate_metabolism
phosphatidylinositol metabolic process,
phosphatidylinositol phosphate kinase activity,
Phagosome
cellular protein metabolic process,
TKL-Pl-6 (from iTAK)
| details | | CFinderM001683 | Steroid_biosynthesis
RLK-Pelle_WAK_LRK10L-1 (from iTAK)
TKL-Pl-6 (from iTAK)
sterol_24-C-methyltransferase_activity
protein serine/threonine kinase activity,
protein phosphorylation,
steroid biosynthetic process,
single-stranded DNA binding,
protein kinase activity,
transferase activity, transferring phosphorus-containing groups,
TKL-Pl-4 (from iTAK)
GARP-G2-like Transcription_Regulator(from iTAK)
G2-like Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001703 | Endocytosis
regulation of ARF GTPase activity,
ARF GTPase activator activity,
| details | | CFinderM001735 | TALE Transcription_Regulator(from PlantTFDB)
HB-BELL Transcription_Regulator(from iTAK)
| details | | CFinderM001756 | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
Lipoic_acid_metabolism
HB-BELL Transcription_Regulator(from iTAK)
TALE Transcription_Regulator(from PlantTFDB)
aromatic amino acid family biosynthetic process,
lipoate biosynthetic process,
lipoate synthase activity,
3-dehydroquinate synthase activity,
| details | | CFinderM001801 | GH17 Glycoside_Hydrolases
phospholipid transport,
phosphatidylinositol metabolic process,
Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
RNA_degradation
Arginine_and_proline_metabolism
Phagosome
| details | | CFinderM001809 | Lipoic_acid_metabolism
TKL-Pl-6 (from iTAK)
chloroplast,
lipoate biosynthetic process,
lipoate synthase activity,
| details | | CFinderM001854 | HSF Transcription_Regulator(from PlantTFDB)
fatty-acyl-CoA binding,
| details |
4.Expression profilings |
