CFinderM000909's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Homologous_recombination0.020193963KEGG
DNA_replication0.020193963KEGG
Mismatch_repair0.020193963KEGG
histone-lysine N-methyltransferase activity,0.027779891GO:0018024
single-stranded DNA binding,0.027779891GO:0003697
Golgi vesicle transport,0.044819417GO:0048193

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000004G3200-- (-)
PH01000051G0980Nucleic acid-binding, OB-fold-like proteinAT3G18580 (2.20E-25)
PH01000301G0590Ras-related small GTP-binding family proteinAT3G54840 (1.90E-75)
PH01001069G0040Nucleotide-sugar transporter family proteinAT4G09810 (3.40E-92)
PH01002106G0290syntaxin of plants 61AT1G28490 (1.00E-54)
PH01002324G0310-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000745GMP synthase (glutamine-hydrolyzing) activity,
pyrophosphatase_activity
CMGC_GSK (from iTAK)
protein-arginine_deiminase_activity
details
CFinderM001019protein transport,
details
CFinderM001105Endocytosis
pseudouridine synthesis,
RNA modification,
regulation_of_cyclin-dependent_protein_serine/threonine_kinase_activity
protein_kinase_binding
pseudouridine synthase activity,
details
CFinderM001106Endocytosis
details
CFinderM001583endoplasmic reticulum,
bZIP Transcription_Regulator(from PlantTFDB)
details
CFinderM001805Golgi vesicle transport,
vesicle-mediated transport,
Spliceosome
details
CFinderM001875histone deacetylation,
histone deacetylase activity,
DNA_replication
Mismatch_repair
Nucleotide_excision_repair
DNA_replication
details

4.Expression profilings