|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, | 0.005625233 | GO:0008686 | | glucose-6-phosphate isomerase activity, | 0.005625233 | GO:0004347 | | sterol_24-C-methyltransferase_activity | 0.005625233 | GO:0003838 | | GTP cyclohydrolase II activity, | 0.005625233 | GO:0003935 | | riboflavin biosynthetic process, | 0.022468922 | GO:0009231 | | steroid biosynthetic process, | 0.022468922 | GO:0006694 | | gluconeogenesis, | 0.022468922 | GO:0006094 | | isoprenoid biosynthetic process, | 0.041536128 | GO:0008299 |
2.Module member annotation
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000237 | solute:hydrogen antiporter activity,
| details | | CFinderM000697 | Valine,_leucine_and_isoleucine_biosynthesis
Valine,_leucine_and_isoleucine_degradation
| details | | CFinderM000927 | proton-transporting two-sector ATPase complex, catalytic domain,
Oxidative_phosphorylation
ATP metabolic process,
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances,
proton-transporting ATPase activity, rotational mechanism,
proton transport,
ATP hydrolysis coupled proton transport,
Phagosome
proton-transporting V-type ATPase, V1 domain,
glucose-6-phosphate isomerase activity,
proton-transporting ATP synthase complex, catalytic core F(1),
gluconeogenesis,
hydrogen ion transporting ATP synthase activity, rotational mechanism,
ATP synthesis coupled proton transport,
actin binding,
glycolysis,
| details | | CFinderM001312 | metalloendopeptidase activity,
Riboflavin_metabolism
6-phosphofructokinase complex,
GTP cyclohydrolase II activity,
catalytic activity,
3,4-dihydroxy-2-butanone-4-phosphate synthase activity,
proteolysis,
riboflavin biosynthetic process,
metallopeptidase activity,
6-phosphofructokinase activity,
glycolysis,
| details | | CFinderM001368 | Protein_processing_in_endoplasmic_reticulum
cell redox homeostasis,
endoplasmic reticulum,
| details | | CFinderM001455 | Amino_sugar_and_nucleotide_sugar_metabolism
CAMK_CDPK (from iTAK)
carbohydrate phosphorylation,
mitochondrial electron transport, ubiquinol to cytochrome c,
galactose metabolic process,
ubiquinol-cytochrome-c reductase activity,
galactokinase activity,
| details | | CFinderM001503 | methyltransferase activity,
DNA metabolic process,
nuclease activity,
MYB-related Transcription_Regulator(from iTAK)
MYB_related Transcription_Regulator(from PlantTFDB)
cell redox homeostasis,
Nucleotide_excision_repair
| details | | CFinderM001562 | HB-KNOX Transcription_Regulator(from iTAK)
sterol_24-C-methyltransferase_activity
TALE Transcription_Regulator(from PlantTFDB)
SNARE_interactions_in_vesicular_transport
Steroid_biosynthesis
MYB-related Transcription_Regulator(from iTAK)
MYB_related Transcription_Regulator(from PlantTFDB)
Ascorbate_and_aldarate_metabolism
| details | | CFinderM001671 | Phagosome
proton-transporting V-type ATPase, V1 domain,
mitochondrial proton-transporting ATP synthase complex, coupling factor F(o),
ion_transmembrane_transport
hydrogen ion transmembrane transporter activity,
proton-transporting ATPase activity, rotational mechanism,
| details | | CFinderM001696 | phenylalanyl-tRNA aminoacylation,
microtubule,
mitochondrial outer membrane,
protein complex,
Fatty_acid_metabolism
Peroxisome
Aminoacyl-tRNA_biosynthesis
phenylalanine-tRNA ligase activity,
tRNA aminoacylation,
protein polymerization,
microtubule-based process,
tRNA binding,
| details | | CFinderM001771 | Terpenoid_backbone_biosynthesis
isoprenoid biosynthetic process,
regulation of Rab GTPase activity,
Rab GTPase activator activity,
acid-amino acid ligase activity,
| details | | CFinderM001774 | regulation of Rab GTPase activity,
Rab GTPase activator activity,
intracellular,
DNA metabolic process,
isoprenoid biosynthetic process,
nuclease activity,
Nucleotide_excision_repair
Terpenoid_backbone_biosynthesis
| details | | CFinderM001867 | Pseudo ARR-B Transcription_Regulator(from iTAK)
Riboflavin_metabolism
GTP cyclohydrolase II activity,
3,4-dihydroxy-2-butanone-4-phosphate synthase activity,
mRNA_surveillance_pathway
riboflavin biosynthetic process,
protein catabolic process,
two-component signal transduction system (phosphorelay),
| details | | CFinderM001872 | 3,4-dihydroxy-2-butanone-4-phosphate synthase activity,
GTP cyclohydrolase II activity,
Riboflavin_metabolism
riboflavin biosynthetic process,
isoprenoid biosynthetic process,
nucleic acid binding,
Terpenoid_backbone_biosynthesis
| details | | CFinderM001895 | phenylalanyl-tRNA aminoacylation,
mitochondrial outer membrane,
Aminoacyl-tRNA_biosynthesis
tRNA aminoacylation,
phenylalanine-tRNA ligase activity,
tRNA binding,
| details |
4.Expression profilings |
