CFinderM000192's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
protein serine/threonine kinase activity,0.000152997GO:0004674
protein kinase activity,0.00015504GO:0004672
exonuclease activity,0.00015504GO:0004527
protein phosphorylation,0.000179535GO:0006468
transferase activity, transferring phosphorus-containing groups,0.000275206GO:0016772
ATP binding,0.001014226GO:0005524
polysaccharide_binding0.002406651GO:0030247
RLK-Pelle_SD-2b (from iTAK)0.002679097GFam
RLK-Pelle_WAK (from iTAK)0.037154494GFam
ubiquitin ligase complex,0.04444108GO:0000151
RLK-Pelle_LRR-Xb-2 (from iTAK)0.0445373GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000001G4030cell wall-associated kinaseAT1G21250 (3.60E-92)
PH01000002G2720Protein kinase superfamily proteinAT5G50860 (1.90E-54)
PH01000025G0960Protein kinase superfamily proteinAT2G23450 (5.30E-73)
PH01000053G0500-- (-)
PH01000078G1770Polynucleotidyl transferase, ribonuclease H-like superfamily proteinAT5G07710 (8.80E-62)
PH01000099G1710Serine protease inhibitor, potato inhibitor I-type family proteinAT5G43580 (6.10E-07)
PH01000103G1450Polynucleotidyl transferase, ribonuclease H-like superfamily proteinAT5G07710 (3.00E-125)
PH01000120G0050TPX2 (targeting protein for Xklp2) protein familyAT4G32330 (2.80E-37)
PH01000185G0660NRAMP metal ion transporter 2AT1G47240 (9.00E-104)
PH01000186G1360glutaredoxin-relatedAT3G11920 (2.00E-162)
PH01000232G0400PLAC8 family proteinAT3G10980 (3.00E-151)
PH01000240G0310AMP-dependent synthetase and ligase family proteinAT4G23850 (0.00E+00)
PH01000437G0510fucosyltransferase 1AT2G03220 (4.00E-149)
PH01000468G0190aminophospholipid ATPase 1AT5G04930 (0.00E+00)
PH01000500G0890ATP binding cassette subfamily B4AT2G47000 (0.00E+00)
PH01000562G0230Polynucleotidyl transferase, ribonuclease H-like superfamily proteinAT5G07710 (1.00E-125)
PH01000603G0510UDP-glucosyl transferase 88A1AT3G16520 (3.30E-46)
PH01000773G0150Protein kinase superfamily proteinAT2G17220 (3.00E-133)
PH01000815G0520plant U-box 14AT3G54850 (0.00E+00)
PH01000832G0370plant U-box 14AT3G54850 (2.00E-174)
PH01000892G0170GDSL-like Lipase/Acylhydrolase superfamily proteinAT5G45910 (8.10E-30)
PH01000992G0570Leucine-rich repeat (LRR) family proteinAT5G21090 (1.40E-75)
PH01001003G0530anthranilate synthase 2AT2G29690 (1.70E-58)
PH01001037G0100ENTH/VHS/GAT family proteinAT2G38410 (4.80E-34)
PH01001155G0110Nucleotide-diphospho-sugar transferases superfamily proteinAT4G16600 (5.00E-171)
PH01001228G0180phosphate transporter 3;2AT3G48850 (9.00E-138)
PH01001295G0430wall associated kinase 5AT1G21230 (3.00E-131)
PH01001530G0300S-locus lectin protein kinase family proteinAT2G19130 (1.20E-72)
PH01001647G0320cytochrome P450, family 72, subfamily A, polypeptide 14AT3G14680 (3.00E-153)
PH01001728G0060Leucine-rich repeat protein kinase family proteinAT1G06840 (6.40E-52)
PH01002022G0260Leucine-rich repeat protein kinase family proteinAT1G74360 (0.00E+00)
PH01002036G0290Nucleotide-diphospho-sugar transferases superfamily proteinAT1G27600 (1.90E-44)
PH01002152G0050PLAC8 family proteinAT1G63830 (1.40E-92)
PH01002161G0010GDSL-like Lipase/Acylhydrolase superfamily proteinAT5G45910 (5.90E-69)
PH01002522G0080-- (-)
PH01002522G0090Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family proteinAT1G68390 (2.50E-67)
PH01003662G0190PR5-like receptor kinaseAT5G38280 (1.10E-97)
PH01003702G0100receptor lectin kinaseAT2G37710 (0)
PH01004098G0010non-specific phospholipase C4AT3G03530 (0.00E+00)
PH01004563G0010cysteine-rich RLK (RECEPTOR-like protein kinase) 25AT4G05200 (1.10E-85)
PH01006208G0040Cyclophilin-like peptidyl-prolyl cis-trans isomerase family proteinAT4G34960 (1.50E-85)
PH01150229G0010Protein kinase superfamily proteinAT5G24080 (3.10E-66)
PH01156673G0010Receptor-like protein kinase-related family proteinAT3G22060 (3.00E-28)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000016protein phosphorylation,
protein kinase activity,
transferase activity, transferring phosphorus-containing groups,
protein serine/threonine kinase activity,
ATP binding,
RLK-Pelle_LRR-XII-1 (from iTAK)
RLK-Pelle_DLSV (from iTAK)
RLK-Pelle_WAK (from iTAK)
ADP_binding
polysaccharide_binding
transmembrane_transporter_activity
WRKY Transcription_Regulator(from PlantTFDB)
recognition of pollen,
transmembrane transport,
defense response,
RLK-Pelle_L-LEC (from iTAK)
membrane,
integral to membrane,
RLK-Pelle_SD-2b (from iTAK)
RLK-Pelle_WAK_LRK10L-1 (from iTAK)
ATPase activity,
substrate-specific transmembrane transporter activity,
RLK-Pelle_LRR-XI-1 (from iTAK)
6-phosphofructokinase complex,
details
CFinderM000084cell wall macromolecule catabolic process,
chitin catabolic process,
WRKY Transcription_Regulator(from PlantTFDB)
defense response to fungus,
ammonium_transport
ammonium_transmembrane_transport
defense response to bacterium,
metabolic process,
chitinase activity,
details
CFinderM000194Group-Pl-3 (from iTAK)
regulation of Rab GTPase activity,
details
CFinderM000225RLK-Pelle_L-LEC (from iTAK)
integral to membrane,
details
CFinderM000530RLK-Pelle_LRR-XIV (from iTAK)
transmembrane transport,
GRAS Transcription_Regulator(from PlantTFDB)
details
CFinderM000531transmembrane transport,
Plant_hormone_signal_transduction
details
CFinderM000561GT4 GlycosylTransferases
NADP_biosynthetic_process
phosphorylation,
NAD+ kinase activity,
peptidyl-prolyl cis-trans isomerase activity,
details
CFinderM000629RLK-Pelle_LRR-XIV (from iTAK)
AUX/IAA Transcription_Regulator(from iTAK)
transcription factor TFIID complex,
Drug_metabolism_-_cytochrome_P450
Metabolism_of_xenobiotics_by_cytochrome_P450
Basal_transcription_factors
details
CFinderM000642details
CFinderM000649B3 Transcription_Regulator(from PlantTFDB)
details
CFinderM000668RLK-Pelle_WAK (from iTAK)
polysaccharide_binding
protein binding,
calcium ion binding,
ubiquitin ligase complex,
potassium_ion_transmembrane_transport
protein ubiquitination,
details
CFinderM000695STE_STE11 (from iTAK)
RLK-Pelle_RLCK-VIIa-1 (from iTAK)
SNARE_interactions_in_vesicular_transport
details
CFinderM000768peptidyl-prolyl cis-trans isomerase activity,
details
CFinderM000773GT4 GlycosylTransferases
phosphorylation,
magnesium_ion_transport
peptidyl-prolyl cis-trans isomerase activity,
magnesium_ion_transmembrane_transporter_activity
details
CFinderM001127RLK-Pelle_L-LEC (from iTAK)
details
CFinderM001128Galactose_metabolism
Porphyrin_and_chlorophyll_metabolism
details
CFinderM001274mitochondrial ribosome,
protein folding,
SNARE_interactions_in_vesicular_transport
PHD Transcription_Regulator(from iTAK)
details
CFinderM001275HB-other Transcription_Regulator(from PlantTFDB)
mRNA_surveillance_pathway
details
CFinderM001397GT4 GlycosylTransferases
details
CFinderM001535TAZ Transcription_Regulator(from iTAK)
transcription cofactor activity,
histone acetyltransferase activity,
Oxidative_phosphorylation
peptidyl-prolyl cis-trans isomerase activity,
details
CFinderM001593vacuolar proton-transporting V-type ATPase, V1 domain,
ATP hydrolysis coupled proton transport,
proton-transporting ATPase activity, rotational mechanism,
binding,
details
CFinderM001631Pseudo ARR-B Transcription_Regulator(from iTAK)
transaminase activity,
transferase activity, transferring alkyl or aryl (other than methyl) groups,
inorganic diphosphatase activity,
hydrogen-translocating pyrophosphatase activity,
peptidyl-prolyl cis-trans isomerase activity,
two-component response regulator activity,
details
CFinderM001687details
CFinderM001788protein folding,
protein catabolic process,
details

4.Expression profilings


Show details about module gene expression profiling