|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | GRAS Transcription_Regulator(from PlantTFDB) | 0.01680106 | GFam | | protein catabolic process, | 0.020199112 | GO:0030163 |
2.Module member annotation
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000593 | nicotinate nucleotide salvage,
diphosphomevalonate decarboxylase activity,
nicotinate phosphoribosyltransferase activity,
nicotinate-nucleotide diphosphorylase (carboxylating) activity,
NAD biosynthetic process,
Nicotinate_and_nicotinamide_metabolism
isoprenoid biosynthetic process,
Terpenoid_backbone_biosynthesis
large ribosomal subunit,
| details | | CFinderM000694 | IWS1 Transcription_Regulator(from iTAK)
| details | | CFinderM000695 | STE_STE11 (from iTAK)
RLK-Pelle_RLCK-VIIa-1 (from iTAK)
SNARE_interactions_in_vesicular_transport
| details | | CFinderM000801 | arsenite_transport
arsenite transmembrane transporter activity,
galactose metabolic process,
G2-like Transcription_Regulator(from PlantTFDB)
GARP-G2-like Transcription_Regulator(from iTAK)
UDP-glucose 4-epimerase activity,
| details | | CFinderM000868 | proteasome_regulatory_particle
Peroxisome
Proteasome
Fatty_acid_metabolism
| details | | CFinderM000900 | phosphopyruvate hydratase complex,
glycolysis,
phosphopyruvate hydratase activity,
Alanine,_aspartate_and_glutamate_metabolism
TKL-Pl-6 (from iTAK)
magnesium ion binding,
argininosuccinate synthase activity,
6-phosphofructokinase complex,
arginine biosynthetic process,
| details | | CFinderM000991 | cation:chloride_symporter_activity
proteasome_regulatory_particle
Proteasome
microtubule binding,
cytokinesis
ion transport,
microtubule cytoskeleton organization,
| details | | CFinderM001004 | IWS1 Transcription_Regulator(from iTAK)
heme_a_biosynthetic_process
threonyl-tRNA aminoacylation,
tRNA aminoacylation,
threonine-tRNA ligase activity,
Aminoacyl-tRNA_biosynthesis
Porphyrin_and_chlorophyll_metabolism
ligase activity, forming aminoacyl-tRNA and related compounds,
oxidoreductase activity, acting on the CH-CH group of donors,
Oxidative_phosphorylation
nucleotide binding,
tRNA aminoacylation for protein translation,
| details | | CFinderM001082 | IWS1 Transcription_Regulator(from iTAK)
protein catabolic process,
| details | | CFinderM001083 | MYB-related Transcription_Regulator(from iTAK)
MYB_related Transcription_Regulator(from PlantTFDB)
Pseudo ARR-B Transcription_Regulator(from iTAK)
protein import into mitochondrial inner membrane,
transcription, DNA-dependent,
nucleus,
IWS1 Transcription_Regulator(from iTAK)
GNAT Transcription_Regulator(from iTAK)
| details | | CFinderM001174 | arsenite transmembrane transporter activity,
arsenite_transport
DNA photolyase activity,
| details | | CFinderM001275 | HB-other Transcription_Regulator(from PlantTFDB)
mRNA_surveillance_pathway
| details | | CFinderM001285 | PcG_protein_complex
cation:chloride_symporter_activity
SET Transcription_Regulator(from iTAK)
cytoskeleton,
ion transport,
| details | | CFinderM001397 | GT4 GlycosylTransferases
| details | | CFinderM001405 | transcription factor TFIIF complex,
transcription initiation from RNA polymerase II promoter,
Basal_transcription_factors
Endocytosis
Oxidative_phosphorylation
protein catabolic process,
| details | | CFinderM001524 | diphosphomevalonate decarboxylase activity,
Peroxisome
6-phosphofructokinase complex,
Terpenoid_backbone_biosynthesis
RWP-RK Transcription_Regulator(from iTAK)
Nin-like Transcription_Regulator(from PlantTFDB)
6-phosphofructokinase activity,
GRAS Transcription_Regulator(from PlantTFDB)
isoprenoid biosynthetic process,
glycolysis,
| details | | CFinderM001535 | TAZ Transcription_Regulator(from iTAK)
transcription cofactor activity,
histone acetyltransferase activity,
Oxidative_phosphorylation
peptidyl-prolyl cis-trans isomerase activity,
| details | | CFinderM001618 | transcription factor TFIIF complex,
transcription initiation from RNA polymerase II promoter,
Basal_transcription_factors
Endocytosis
protein catabolic process,
| details | | CFinderM001635 | Ribosome
translation,
Ribosome
intracellular,
C3H Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001721 | STE_STE11 (from iTAK)
outer membrane,
Endocytosis
| details | | CFinderM001788 | protein folding,
protein catabolic process,
| details | | CFinderM001816 | transcription factor TFIIF complex,
Basal_transcription_factors
transcription initiation from RNA polymerase II promoter,
protein catabolic process,
| details | | CFinderM001823 | large ribosomal subunit,
| details | | CFinderM001840 | transcription factor TFIIF complex,
STE_STE11 (from iTAK)
diphosphomevalonate decarboxylase activity,
ATP binding,
histone deacetylase activity,
histone deacetylation,
transcription initiation from RNA polymerase II promoter,
Basal_transcription_factors
Terpenoid_backbone_biosynthesis
protein catabolic process,
isoprenoid biosynthetic process,
Endocytosis
| details | | CFinderM001866 | sterol metabolic process,
Steroid_biosynthesis
cholestenol delta-isomerase activity,
protein catabolic process,
MYB_related Transcription_Regulator(from PlantTFDB)
C3H Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
| details | | CFinderM001867 | Pseudo ARR-B Transcription_Regulator(from iTAK)
Riboflavin_metabolism
GTP cyclohydrolase II activity,
3,4-dihydroxy-2-butanone-4-phosphate synthase activity,
mRNA_surveillance_pathway
riboflavin biosynthetic process,
protein catabolic process,
two-component signal transduction system (phosphorelay),
| details |
4.Expression profilings |
