CFinderM001834's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
phosphopyruvate hydratase complex,0.005622275GO:0000015
TAZ Transcription_Regulator(from iTAK)0.008247292GFam
L-malate dehydrogenase activity,0.020928346GO:0030060
transcription cofactor activity,0.020928346GO:0003712
malate dehydrogenase activity,0.020928346GO:0016615
phosphopyruvate hydratase activity,0.020928346GO:0004634
histone acetyltransferase activity,0.020928346GO:0004402
malate metabolic process,0.027527629GO:0006108
cellular carbohydrate metabolic process,0.027527629GO:0044262
MYB-related Transcription_Regulator(from iTAK)0.029033967GFam
MYB_related Transcription_Regulator(from PlantTFDB)0.029033967GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000145G0550histone acetyltransferase of the CBP family 12AT1G16710 (0.00E+00)
PH01000305G1060Lactate/malate dehydrogenase family proteinAT5G43330 (9.00E-155)
PH01000428G0040Duplicated homeodomain-like superfamily proteinAT3G52250 (1.00E-84)
PH01001577G0380RNA polymerase II transcription mediatorsAT4G00450 (2.30E-30)
PH01002251G0250EnolaseAT2G36530 (0.00E+00)
PH01002687G0240histone acetyltransferase of the CBP family 1AT1G79000 (3.00E-151)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000111protein insertion into membrane,
ATP citrate synthase activity,
succinate-CoA ligase (ADP-forming) activity,
regulation_of_anion_transport
voltage-gated anion channel activity,
anion transport,
details
CFinderM000117nuclear chromosome,
Glycolysis_/_Gluconeogenesis
Ino80_complex
ATP citrate synthase activity,
phosphoglycerate kinase activity,
succinate-CoA ligase (ADP-forming) activity,
details
CFinderM000496cullin-RING ubiquitin ligase complex,
ubiquitin protein ligase binding,
Pseudo ARR-B Transcription_Regulator(from iTAK)
ubiquitin-dependent protein catabolic process,
diphosphomevalonate decarboxylase activity,
L,L-diaminopimelate_aminotransferase_activity
Citrate_cycle_(TCA_cycle)
Pyruvate_metabolism
details
CFinderM000712anion transport,
regulation_of_anion_transport
protein insertion into membrane,
mitochondrial outer membrane,
phosphopyruvate hydratase complex,
voltage-gated anion channel activity,
phosphopyruvate hydratase activity,
details
CFinderM001030protein import into mitochondrial inner membrane,
RLK-Pelle_L-LEC (from iTAK)
protein methylation,
details
CFinderM001083MYB-related Transcription_Regulator(from iTAK)
MYB_related Transcription_Regulator(from PlantTFDB)
Pseudo ARR-B Transcription_Regulator(from iTAK)
protein import into mitochondrial inner membrane,
transcription, DNA-dependent,
nucleus,
IWS1 Transcription_Regulator(from iTAK)
GNAT Transcription_Regulator(from iTAK)
details
CFinderM001419nucleocytoplasmic transport,
GTP_catabolic_process
small GTPase mediated signal transduction,
protein transport,
signal transduction,
intracellular protein transport,
cellular carbohydrate metabolic process,
malate metabolic process,
GTPase activity,
GTP binding,
malate dehydrogenase activity,
L-malate dehydrogenase activity,
intracellular,
Pyruvate_metabolism
Carbon_fixation_in_photosynthetic_organisms
Glyoxylate_and_dicarboxylate_metabolism
Citrate_cycle_(TCA_cycle)
membrane,
details
CFinderM001535TAZ Transcription_Regulator(from iTAK)
transcription cofactor activity,
histone acetyltransferase activity,
Oxidative_phosphorylation
peptidyl-prolyl cis-trans isomerase activity,
details
CFinderM001569Alanine,_aspartate_and_glutamate_metabolism
TAZ Transcription_Regulator(from iTAK)
Group-Pl-3 (from iTAK)
CMGC_CLK (from iTAK)
NF-YC Transcription_Regulator(from PlantTFDB)
HB-other Transcription_Regulator(from PlantTFDB)
arginine biosynthetic process,
'de novo' IMP biosynthetic process,
eukaryotic translation elongation factor 1 complex,
argininosuccinate synthase activity,
phosphoribosylformylglycinamidine cyclo-ligase activity,
details
CFinderM001749phosphoribosylformylglycinamidine cyclo-ligase activity,
autophagy,
'de novo' IMP biosynthetic process,
cellular protein metabolic process,
details
CFinderM001835MYB_related Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
nuclear chromosome,
chromatin binding,
details

4.Expression profilings